The detailed information of tRNA gene sequence


Sequence ID>A171004606
Genome IDCP009502
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina thermophila CHTI-55 [CP009502]
Start position on genome 967290
End posion on genome 967214
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ctgccatttg
tRNA gene sequence 
GGGCCCGTAGCTTAGCCTGGCGGAGCGCACGGCTGATAACCGTGAGGTCCTGCGTTCGAA
TCGCAGCGGGCCCACCA
Downstream region at tRNA end position 
aattcaatat
Secondary structure (Cloverleaf model)
>A171004606	Ile	GAT
                   g      ACCA aattcaatat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C G C     A
      C G A        A      | | | | |     G
    C       T T C G       C T G C G     C
    T       + | | |                 T T
    G       G A G C
      G C G        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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