The detailed information of tRNA gene sequence


Sequence ID>A171004677
Genome IDCP009504
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina sp. WH1 [CP009504]
Start position on genome 3243417
End posion on genome 3243490
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
aagacagtaT
tRNA gene sequence 
GCGACCGTGGTTTAGTGGCTATGACCTGAGCTTCCCAAGCTTAGAACCCGGGTTCGAATC
CCGGCGGTCGCATtt
Downstream region at tRNA end position 
caggcttttt
Secondary structure (Cloverleaf model)
>A171004677	Gly	CCC
                   T      ATtt caggcttttt
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       T T T G       C C G G G     C
    G         + | |                 T T
    C       T G A C
      T A          C     GAAC
                    T - A
                    G + T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.-

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