The detailed information of tRNA gene sequence


Sequence ID>A171004715
Genome IDCP009504
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina sp. WH1 [CP009504]
Start position on genome 72883
End posion on genome 72806
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagccccgT
tRNA gene sequence 
AGCGGGGTGGGGTAGCCAGGAGATCCCGACGGGCTCATAACCCGTAGACCGATGGTTCGA
ATCCATCCCCCGCTATCt
Downstream region at tRNA end position 
acaattcttt
Secondary structure (Cloverleaf model)
>A171004715	Met	CAT
                   T      ATCt acaattcttt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T A C C     A
    C C G A        G      | | | | |     G
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A G A          G     AGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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