The detailed information of tRNA gene sequence


Sequence ID>A171004725
Genome IDCP009505
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina sp. MTP4 [CP009505]
Start position on genome 1004744
End posion on genome 1004820
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
taaacagaag
tRNA gene sequence 
GGGCCCGTAGCTCAGTCAGGCAGAGCGTCTGGCTTTTAACCAGACGGCCTAGGGTTCAAA
TCCCTACGGGCTCGCCA
Downstream region at tRNA end position 
tacttcacac
Secondary structure (Cloverleaf model)
>A171004725	Lys	TTT
                   g      GCCA tacttcacac
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     A T C C C     A
      T G A        A      | | | | |     A
    C       C T C G       T A G G G     C
    A       | | | |                 T T
    G       G A G C
      G C A        G     CGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.-

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