The detailed information of tRNA gene sequence


Sequence ID>A171004733
Genome IDCP009505
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina sp. MTP4 [CP009505]
Start position on genome 3548700
End posion on genome 3548774
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agtactctgc
tRNA gene sequence 
GGGATAGTAGGGTAGCTTGGTCCATCCTCGAGCGTTTGGGACGCTTGGACTGCGGTTCAA
ATCCGCGCTATCCCAtca
Downstream region at tRNA end position 
gatttcttat
Secondary structure (Cloverleaf model)
>A171004733	Pro	TGG
                   c      Atca gatttcttat
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C          T A
                    T     G C G C C     A
    T C G A        A      + | | | |     A
  T         T G G G       T G C G G     C
  G           | | +                 T T
  G         T C C T
    T C C A        C     GGAC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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