The detailed information of tRNA gene sequence


Sequence ID>A171004771
Genome IDCP009506
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina siciliae T4/M [CP009506]
Start position on genome 627157
End posion on genome 627229
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aaatatatgt
tRNA gene sequence 
GCCGTCGTGGCTTAGCGGTATAGCGGCTGATTCGTAATCAGCAGGTCGGGGGTTCAAGTC
CCCCTGACGGCTCtt
Downstream region at tRNA end position 
ttacttattt
Secondary structure (Cloverleaf model)
>A171004771	Thr	CGT
                   t      TCtt ttacttattt
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     C - G
                     G + T          T G
                    T     C C C C C     A
        G A        G      | | | | |     A
      C     T T C G       G G G G G     C
      G       | | |                 T T
      G     T A G C
        T A        G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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