The detailed information of tRNA gene sequence


Sequence ID>A171004822
Genome IDCP009507
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina siciliae HI350 [CP009507]
Start position on genome 55517
End posion on genome 55588
Amino Acid Pseudo
Anticodon GCA
Upstream region at tRNA start position 
atccaccttt
tRNA gene sequence 
GCCAAGATGGCGGAGCGGCTACGCAATCGCCTGCAGAGCGATTCCATTCCAGTTCGAATC
TGGATCTTGGCTttt
Downstream region at tRNA end position 
taatatttct
Secondary structure (Cloverleaf model)
>A171004822	Pseudo	GCA
                   t      Tttt taatatttct
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     A G G T C     A
        G A        G      | | | | |     G
      C     G G C G       T C C A G     C
      G       | | |                 T T
      G     A C G C
        C T        A     TCCAT
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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