The detailed information of tRNA gene sequence


Sequence ID>A171004904
Genome IDCP009508
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina siciliae C2J [CP009508]
Start position on genome 4965962
End posion on genome 4965885
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
attacattgt
tRNA gene sequence 
GGGCGCGTGGCCTAGCCCGGATATGGCGGCAGCCTCCTAAGCTGTAAATCGGGGGTTCAA
ATCCCTTCGCGCCCGCCA
Downstream region at tRNA end position 
atttctatct
Secondary structure (Cloverleaf model)
>A171004904	Arg	CCT
                   t      GCCA atttctatct
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     T T C C C     A
    C C G A        G      + + | | |     A
  C         T C C G       G G G G G     C
  G           | | |                 T T
  G         T G G C
    A T A          G     AAATC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.-

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