The detailed information of tRNA gene sequence


Sequence ID>A171004993
Genome IDCP009511
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina mazei SarPi [CP009511]
Start position on genome 2956652
End posion on genome 2956728
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
taaacaaact
tRNA gene sequence 
GGGCCCGTAGCTCAGTCAGGCAGAGCGACTGGCTTTTAACCAGTCGGCCTAGGGTTCAAA
TCCCTACGGGCCCGCCA
Downstream region at tRNA end position 
tgttctttat
Secondary structure (Cloverleaf model)
>A171004993	Lys	TTT
                   t      GCCA tgttctttat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     A T C C C     A
      T G A        A      | | | | |     A
    C       C T C G       T A G G G     C
    A       | | | |                 T T
    G       G A G C
      G C A        G     CGGCC
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.-

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