The detailed information of tRNA gene sequence


Sequence ID>A171005163
Genome IDCP009514
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina mazei C16 [CP009514]
Start position on genome 3121727
End posion on genome 3121654
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
acatcacata
tRNA gene sequence 
GGGCTCGTGGTCTAGACGGTTATGACGTCGCCTTGACATGGCGGAGGTCCTGAGTTCGAA
TCTCAGCGGGCCCAtat
Downstream region at tRNA end position 
aaatattaat
Secondary structure (Cloverleaf model)
>A171005163	Val	GAC
                   a      Atat aaatattaat
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G A C T C     A
      A G A        G      | | | | |     G
    C       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.-

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