The detailed information of tRNA gene sequence


Sequence ID>A171005171
Genome IDCP009514
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina mazei C16 [CP009514]
Start position on genome 1784148
End posion on genome 1784071
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tctgctctgc
tRNA gene sequence 
GGGGCCGTAGGGTAGCTTGGTCCATCCTGCAAGACTGGGGGTCTTGCGACTTGAGTTCGA
ATCTCAACGGCCCCACCA
Downstream region at tRNA end position 
gaatcacatt
Secondary structure (Cloverleaf model)
>A171005171	Pro	GGG
                   c      ACCA gaatcacatt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     A A C T C     A
    T C G A        A      | | | | |     G
  T         T G G G       T T G A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        G     CGAC
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.-

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