The detailed information of tRNA gene sequence


Sequence ID>A171005201
Genome IDCP009515
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina lacustris Z-7289 [CP009515]
Start position on genome 1451164
End posion on genome 1451236
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
agaccctgtg
tRNA gene sequence 
GCCGGGGTAGGGTAGAGGTCATCCTGTGGCCCTGTGGAGGCCACGATCCGAGTTCAATTC
TCGGTCCCGGCCCta
Downstream region at tRNA end position 
aatacttttt
Secondary structure (Cloverleaf model)
>A171005201	His	GTG
                   g      CCta aatacttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T T
                    T     G G C T C     A
      A G A        A      | | | | |     A
    G       T G G G       C C G A G     C
    G         | | +                 T T
    T       T C C T
      C A          G     CGAT
                    T - A
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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