The detailed information of tRNA gene sequence


Sequence ID>A171005244
Genome IDCP009516
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina horonobensis HB-1 = JCM 15518 [CP009516]
Start position on genome 555357
End posion on genome 555443
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agttcgataT
tRNA gene sequence 
GACGAGATAGCCAAGCCCGGTATGGCGCGGGATTGCTAATCCCGTGATGCCCTGCATCCC
GGGGGTTCGAGTCCCCCTCTCGTCGTtt
Downstream region at tRNA end position 
cttttttcat
Secondary structure (Cloverleaf model)
>A171005244	Ser	GCT
                   T      GTtt cttttttcat
                     G - C
                     A - T
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T G
                    T     C C C C C     A
      C G A        A      | | | | |     G
    C       A C C G       G G G G G     C
    C       | | | |                 T T
    G       T G G C
      G T A        G     TGATGCCCTGCATCCC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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