The detailed information of tRNA gene sequence


Sequence ID>A171005256
Genome IDCP009516
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina horonobensis HB-1 = JCM 15518 [CP009516]
Start position on genome 4379488
End posion on genome 4379572
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttatcaaagT
tRNA gene sequence 
GCCCAGGTCGTCTAGCGGTAGGGCGACGGTCTCGAAAACCGTTTCTCCTTGGGGGATCGC
AGGTTCGAATCCTGCCCTGGGCGTaa
Downstream region at tRNA end position 
caactaaccg
Secondary structure (Cloverleaf model)
>A171005256	Ser	CGA
                   T      GTaa caactaaccg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G T C C     A
        G A        C      | | | | |     G
      C     T C T G       G C A G G     C
      G     + | + |                 T T
      G     G G G C
        T A        G     TTCTCCTTGGGGGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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