The detailed information of tRNA gene sequence


Sequence ID>A171005260
Genome IDCP009516
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina horonobensis HB-1 = JCM 15518 [CP009516]
Start position on genome 4791457
End posion on genome 4791530
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agaccgaagt
tRNA gene sequence 
GTCCGGATAGTGTAGAGGCCTATCATGGAGCCCTGTCGAGGCTCCGACTCGGGTTCGAAT
CCCGGTCCGGGCGCtt
Downstream region at tRNA end position 
cttttttttg
Secondary structure (Cloverleaf model)
>A171005260	Asp	GTC
                   t      GCtt cttttttttg
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     G G C C C     A
      A G A        A      + | | | |     G
    G       T G T G       T C G G G     C
    G         | | +                 T T
    C       T C A T
      C T A        G     CGAC
                    G - C
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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