The detailed information of tRNA gene sequence


Sequence ID>A171005263
Genome IDCP009516
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina horonobensis HB-1 = JCM 15518 [CP009516]
Start position on genome 4435507
End posion on genome 4435436
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
caatccatgt
tRNA gene sequence 
GCCGTCGTGGCTTAGCGGTATAGCGGCTGATTCGTAATCAGCAGGTCGAGGGTTCAAATC
CCTCCGGCGGCTatc
Downstream region at tRNA end position 
ggtttttttg
Secondary structure (Cloverleaf model)
>A171005263	Thr	CGT
                   t      Tatc ggtttttttg
                     G - C
                     C - G
                     C - G
                     G - C
                     T + G
                     C - G
                     G - C          T A
                    T     C T C C C     A
        G A        G      | | | | |     A
      C     T T C G       G A G G G     C
      G       | | |                 T T
      G     T A G C
        T A        G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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