The detailed information of tRNA gene sequence


Sequence ID>A171005271
Genome IDCP009516
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina horonobensis HB-1 = JCM 15518 [CP009516]
Start position on genome 3231725
End posion on genome 3231640
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atttcaacat
tRNA gene sequence 
GCTGAGGTAGCCCAGCGGACCACGGCGCCGGTCTTGAAAACCGGTAGCGCTACGCGCTAC
GGGAGTTCGAATCTCCCCCTCAGCGCta
Downstream region at tRNA end position 
acttcactgg
Secondary structure (Cloverleaf model)
>A171005271	Ser	TGA
                   t      GCta acttcactgg
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      C G A        A      | | | | |     G
    G       C C C G       G G G A G     C
    G         | | |                 T T
    A       C G G C
      C C A        G     TAGCGCTACGCGCTAC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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