The detailed information of tRNA gene sequence


Sequence ID>A171005273
Genome IDCP009516
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina horonobensis HB-1 = JCM 15518 [CP009516]
Start position on genome 2409452
End posion on genome 2409381
Amino Acid Pseudo
Anticodon GCA
Upstream region at tRNA start position 
aacgttatcc
tRNA gene sequence 
GTCAGAATGGCAGAGTGGTTATGCTTCCGGCTGCAACCCGGAATTATGTGAGTTCGATTC
TCACTTCTGACTttt
Downstream region at tRNA end position 
aaacagttta
Secondary structure (Cloverleaf model)
>A171005273	Pseudo	GCA
                   c      Tttt aaacagttta
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C
                     A - T
                     A - T          T T
                    T     C A C T C     A
        G A        G      | | | | |     G
      T     G A C G       G T G A G     C
      G       | | |                 T T
      G     A T G C
        T T        T     ATTAT
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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