The detailed information of tRNA gene sequence


Sequence ID>A171005280
Genome IDCP009516
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina horonobensis HB-1 = JCM 15518 [CP009516]
Start position on genome 1658181
End posion on genome 1658095
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gtcacatcgT
tRNA gene sequence 
GCGAGAGTTGCCCAGCCAGGTCAAAGGCGCCAGATTCAGAGTCTGGTCTTGTAGGAGTTC
GTGCGTTCGAATCGCACCTCTCGCATtt
Downstream region at tRNA end position 
atcctttttt
Secondary structure (Cloverleaf model)
>A171005280	Leu	CAG
                   T      ATtt atcctttttt
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C G C     A
    C C G A        T      | | | | |     G
  A         C C C G       G T G C G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCTTGTAGGAGTTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       G
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.-

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