The detailed information of tRNA gene sequence


Sequence ID>A171005288
Genome IDCP009516
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina horonobensis HB-1 = JCM 15518 [CP009516]
Start position on genome 720363
End posion on genome 720290
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
gttgcagttT
tRNA gene sequence 
GCGTTGATGGTCTAGCGGCTATGACTTGGGCCTTCCAAGCCCAAAACCCGGGTTCGAATC
CCGGTCGGCGCATtt
Downstream region at tRNA end position 
aactttttca
Secondary structure (Cloverleaf model)
>A171005288	Gly	TCC
                   T      ATtt aactttttca
                     G - C
                     C - G
                     G - C
                     T + G
                     T + G
                     G - C
                     A - T          T A
                    T     G G C C C     A
      C G A        G      | | | | |     G
    G       T C T G       C C G G G     C
    G         | | |                 T T
    C       T G A C
      T A          T     AAAC
                    T - A
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.-

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