The detailed information of tRNA gene sequence


Sequence ID>A171005357
Genome IDCP009518
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanococcoides methylutens MM1 [CP009518]
Start position on genome 542614
End posion on genome 542686
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaatgaacgc
tRNA gene sequence 
GGGCTTGTAGATCAGTTGGAAGATCGTCGCCTTTGCAAGGCGAAGGCCCTGGGTTCGAAT
CCCAGCAAGTCCAttg
Downstream region at tRNA end position 
gatcaattac
Secondary structure (Cloverleaf model)
>A171005357	Ala	TGC
                   c      Attg gatcaattac
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     G A C C C     A
      T G A        A      | | | | |     G
    T       C T A G       C T G G G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AGGCC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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