The detailed information of tRNA gene sequence


Sequence ID>A171005386
Genome IDCP009518
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanococcoides methylutens MM1 [CP009518]
Start position on genome 1479295
End posion on genome 1479219
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tagcaacact
tRNA gene sequence 
GGGCCCGTGGTCTAGCCGGTCATGACATCGCCTTTACACGGCGGGGGTCGTGAGTTCGAA
TCTCACCGGGCCCACCA
Downstream region at tRNA end position 
cacttctatt
Secondary structure (Cloverleaf model)
>A171005386	Val	TAC
                   t      ACCA cacttctatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    C       T C T G       G T G A G     C
    G         | | |                 T T
    G       T G A C
      T C A        A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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