The detailed information of tRNA gene sequence


Sequence ID>A171005399
Genome IDCP009520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina vacuolata Z-761 [CP009520]
Start position on genome 1730180
End posion on genome 1730252
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agtctctcta
tRNA gene sequence 
GGGCTTGTAGATCAGATGGAAGATCGCTGCCTTTGCAAGGCAGAGGCCCTGGGTTCGAAT
CCCAGCAAGTCCAttt
Downstream region at tRNA end position 
ttgtgcactc
Secondary structure (Cloverleaf model)
>A171005399	Ala	TGC
                   a      Attt ttgtgcactc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     G A C C C     A
      A G A        A      | | | | |     G
    T       C T A G       C T G G G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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