The detailed information of tRNA gene sequence


Sequence ID>A171005425
Genome IDCP009520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina vacuolata Z-761 [CP009520]
Start position on genome 3599245
End posion on genome 3599169
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cctgacattt
tRNA gene sequence 
GGGCCCGTAGCTTAGCTTGGTGGAGCGCACGGCTGATAACCGTGAGGTCCTGCGTTCGAA
TCGCAGCGGGCCCACCA
Downstream region at tRNA end position 
caatatgaca
Secondary structure (Cloverleaf model)
>A171005425	Ile	GAT
                   t      ACCA caatatgaca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C G C     A
      C G A        A      | | | | |     G
    T       T T C G       C T G C G     C
    T       + | | |                 T T
    G       G A G C
      G T G        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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