The detailed information of tRNA gene sequence


Sequence ID>A171005428
Genome IDCP009520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina vacuolata Z-761 [CP009520]
Start position on genome 3290730
End posion on genome 3290654
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agtacccctT
tRNA gene sequence 
GGGATAGTAGGGTAGCTTGGTCCATCCTCGAGCGTTTGGGACGCTTGGACCGCGGTTCAA
ATCCGCGCTATCCCATtt
Downstream region at tRNA end position 
acatattttt
Secondary structure (Cloverleaf model)
>A171005428	Pro	TGG
                   T      ATtt acatattttt
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C          T A
                    T     G C G C C     A
    T C G A        A      | | | | |     A
  T         T G G G       C G C G G     C
  G           | | +                 T T
  G         T C C T
    T C C A        C     GGAC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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