The detailed information of tRNA gene sequence


Sequence ID>A171005540
Genome IDCP009526
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina barkeri str. Wiesmoor [CP009526]
Start position on genome 1978253
End posion on genome 1978168
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ccttcaatat
tRNA gene sequence 
GCGAGGGTTGCCCAGCCAGGCCAAAGGCGCCAGACTTAAGATCTGGTATCGAAGGATTTC
GTGGGTTCGAATCCCACTCCTCGCACta
Downstream region at tRNA end position 
ttttattacg
Secondary structure (Cloverleaf model)
>A171005540	Leu	TAA
                   t      ACta ttttattacg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T          T A
                    T     C A C C C     A
    C C G A        T      | | | | |     G
  A         C C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    C C A A        G     TATCGAAGGATTTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.-

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