The detailed information of tRNA gene sequence


Sequence ID>A171005679
Genome IDCP009552
Search identical group
Phylum/ClassEuryarchaeota
SpeciesGeoglobus acetivorans SBH6 [CP009552]
Start position on genome 1384565
End posion on genome 1384491
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
acaggtccaT
tRNA gene sequence 
GGGCTCGTAGCTCAGCTGGGAGAGCGCCGCCTTTGCGAGGCGGAGGCCTCGGGTTCAAAT
CCCGACGAGTCCATta
Downstream region at tRNA end position 
attcttgtat
Secondary structure (Cloverleaf model)
>A171005679	Ala	TGC
                   T      ATta attcttgtat
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     A G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       T C G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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