The detailed information of tRNA gene sequence


Sequence ID>A171005706
Genome IDCP009961
Search identical group
Phylum/ClassThermoproteota
SpeciesInfirmifilum uzonense 1807-2 [CP009961]
Start position on genome 1300284
End posion on genome 1300370
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
actctagtag
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGCCCAAGGCGACGGATTGCTAATCCGTTTCCCGAAAGGGAACC
CGGGTTCAAATCCCGGCCCCGGCGCCA
Downstream region at tRNA end position 
ttctcggccc
Secondary structure (Cloverleaf model)
>A171005706	Ser	GCT
                   g      GCCA ttctcggccc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     A
    G       G C C G       C C G G G     C
    G         | | |                 T T
    C       A G G C
      C C A        G     TTCCCGAAAGGGAAC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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