The detailed information of tRNA gene sequence


Sequence ID>A171005725
Genome IDCP010070
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanoplasma termitum MpT1 [CP010070]
Start position on genome 845908
End posion on genome 845992
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aggcgccaag
tRNA gene sequence 
GCCGAGATAGTCTAGCCCGGTACGGCGCGAGCCTGGAAAGCTCGTGGGAACTTCCCTCGG
GAGTTCGAATCTCCCTCTCGGCGCCt
Downstream region at tRNA end position 
tttcctttca
Secondary structure (Cloverleaf model)
>A171005725	Ser	GGA
                   g      GCCt tttcctttca
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C T C     A
      C G A        A      | | | | |     G
    C       T C T G       G G G A G     C
    C         | + |                 T T
    G       C G G C
      G T A        G     TGGGAACTTCCCTC
                    C - G
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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