The detailed information of tRNA gene sequence


Sequence ID>A171005730
Genome IDCP010070
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanoplasma termitum MpT1 [CP010070]
Start position on genome 1051690
End posion on genome 1051775
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
catgaaacgg
tRNA gene sequence 
GCCGAGGTAATCTAGTCCGGTAAGGTGGTGGTCTCGAAAACCACTGGCGTTCCGCCTCGG
GAGTTCAAATCTCCTCCTCGGCGCCA
Downstream region at tRNA end position 
cttttcaaaa
Secondary structure (Cloverleaf model)
>A171005730	Ser	CGA
                   g      GCCA cttttcaaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C C T C     A
      T G A        A      + | | | |     A
    C       T C T A       G G G A G     C
    C       | | + |                 T T
    G       A G G T
      G T A        G     TGGCGTTCCGCCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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