The detailed information of tRNA gene sequence


Sequence ID>A171005732
Genome IDCP010070
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanoplasma termitum MpT1 [CP010070]
Start position on genome 1072890
End posion on genome 1072974
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagttgcaat
tRNA gene sequence 
GTGGAGGTAGCCCAGCCTGGTAAGGCGATAGCCTGCTAAGCTATTGTCCCTAGTGACTCG
CGAGTTCGAATCTCGCCCTCCACGCtc
Downstream region at tRNA end position 
atattacaca
Secondary structure (Cloverleaf model)
>A171005732	Ser	GCT
                   t      GCtc atattacaca
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      C G A        A      | | | | |     G
    C       C C C G       G C G A G     C
    T         | | |                 T T
    G       A G G C
      G T A        G     TGTCCCTAGTGACTC
                    A - T
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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