The detailed information of tRNA gene sequence


Sequence ID>A171005741
Genome IDCP010070
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanoplasma termitum MpT1 [CP010070]
Start position on genome 1129289
End posion on genome 1129214
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gtgacgcatc
tRNA gene sequence 
GGGCTCATGGTCTAGGGGTTATGACGGCGCCCTTACAAGGCGCAGATCGCCGGTTCAATT
CCGGCTGGGCCCACCA
Downstream region at tRNA end position 
ctctgttatt
Secondary structure (Cloverleaf model)
>A171005741	Val	TAC
                   c      ACCA ctctgttatt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     A - T          T T
                    T     C G G C C     A
      G G A        G      | | | | |     A
    G       T C T G       G C C G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGATC
                    G - C
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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