The detailed information of tRNA gene sequence


Sequence ID>A171005742
Genome IDCP010070
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanoplasma termitum MpT1 [CP010070]
Start position on genome 863304
End posion on genome 863230
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aggacataac
tRNA gene sequence 
GGGCAGGTAGATCAGTTGGAAGATCGCTACATTGGCATTGTAGAGGTCGCGAGTTCGAAT
CTCGCTCTGTCCACCt
Downstream region at tRNA end position 
tcaattatta
Secondary structure (Cloverleaf model)
>A171005742	Ala	GGC
                   c      ACCt tcaattatta
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     C G C T C     A
      T G A        A      | | | | |     G
    T       C T A G       G C G A G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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