The detailed information of tRNA gene sequence


Sequence ID>A171005743
Genome IDCP010070
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanoplasma termitum MpT1 [CP010070]
Start position on genome 838719
End posion on genome 838646
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tggaaaataa
tRNA gene sequence 
GCTCCTGTAGTGTAGCGGCCAATCATGAAGCCCTCTCGAGGCTTCGACTCGGGTTCAAAT
CCCGGCGGGAGCACta
Downstream region at tRNA end position 
atccaaatta
Secondary structure (Cloverleaf model)
>A171005743	Glu	CTC
                   a      ACta atccaaatta
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      + | | | |     A
    G       T G T G       T C G G G     C
    G         | | +                 T T
    C       T C A T
      C A A        G     CGAC
                    A - T
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.-

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