The detailed information of tRNA gene sequence


Sequence ID>A171005798
Genome IDCP010529
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula sp. CBA1115 [CP010529]
Start position on genome 1649266
End posion on genome 1649338
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atgttgatgc
tRNA gene sequence 
GGGATCGTGGGGTAGCTTGGTAACCTTCGGGCCTTGGGTGCCCGCGCCCCTAGTTCAAAT
CTGGGCGATCCCAtcc
Downstream region at tRNA end position 
ctaccacact
Secondary structure (Cloverleaf model)
>A171005798	Pro	TGG
                   c      Atcc ctaccacact
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C          T A
                    T     G G G T C     A
      C G A        G      | | + | |     A
    T       T G G G       C C T A G     C
    T       | | | +                 T T
    G       A C C T
      G T A        T     CGCC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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