The detailed information of tRNA gene sequence


Sequence ID>A171005799
Genome IDCP010529
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula sp. CBA1115 [CP010529]
Start position on genome 1822695
End posion on genome 1822766
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cggatctgcc
tRNA gene sequence 
GGGCCCATAGCTCAGCGGGAGAGCGCCGCCTTTGCAAGGCGGAGGCCCTGGGTTCAAATC
CCAGTGGGTCCAtac
Downstream region at tRNA end position 
gacgtgccag
Secondary structure (Cloverleaf model)
>A171005799	Ala	TGC
                   c      Atac gacgtgccag
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G A C C C     A
        G A        A      | | | | |     A
      C     C T C G       C T G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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