The detailed information of tRNA gene sequence


Sequence ID>A171005821
Genome IDCP010529
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula sp. CBA1115 [CP010529]
Start position on genome 1266736
End posion on genome 1266661
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
atgcgttcgC
tRNA gene sequence 
GCCGCCGTAGCTCAGTTGGTAGAGCACCTGGTTGTTACCCAGGTTGTCCCAGGTTCGAGC
CCTGGCGGTGGCGTCg
Downstream region at tRNA end position 
ttctttcact
Secondary structure (Cloverleaf model)
>A171005821	Asn	GTT
                   C      GTCg ttctttcact
                     G - C
                     C - G
                     C - G
                     G + T
                     C - G
                     C - G
                     G - C          C G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       C
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.-

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