The detailed information of tRNA gene sequence


Sequence ID>A171005921
Genome IDCP010868
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus piranensis D3C [CP010868]
Start position on genome 1673071
End posion on genome 1673147
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgattcttgt
tRNA gene sequence 
GGGTCTGTAGTCTAGCCTGGTAGGACGATGGTCTCCAAAACCATCGGTCGTCGGTTCAAA
TCCGTCTGGGCCCACCA
Downstream region at tRNA end position 
ctatctattt
Secondary structure (Cloverleaf model)
>A171005921	Trp	CCA
                   t      ACCA ctatctattt
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     T + G
                     G + T          T A
                    T     C T G C C     A
      C G A        A      |   | | |     A
    C       T C T G       G T C G G     C
    T       + | | |                 T T
    G       G G A C
      G T A        G     CGGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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