The detailed information of tRNA gene sequence


Sequence ID>A171005927
Genome IDCP010868
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus piranensis D3C [CP010868]
Start position on genome 1220588
End posion on genome 1220505
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tagattaatT
tRNA gene sequence 
GCCGGGATAGCCAAGTGGTAAGGCGGCCGTCTCGAAAACGGCTACGTGCAAGCGTGCAGG
GGTTCGAATCCCTTTCCCGGCGTta
Downstream region at tRNA end position 
ttttgcagta
Secondary structure (Cloverleaf model)
>A171005927	Ser	CGA
                   T      GTta ttttgcagta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T T C C C     A
        G A        A      | + | | |     G
      T     A C C G       A G G G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TACGTGCAAGCGTGC
                    G - C
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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