The detailed information of tRNA gene sequence


Sequence ID>A171006016
Genome IDCP011070
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus adriaticus NF5 [CP011070]
Start position on genome 420588
End posion on genome 420674
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcatacttgt
tRNA gene sequence 
GCGGGGGTCGCCTAGCCTGGTAGGGCGTAGGATTGCTAATCCTATGTTCGCAAGAACTCG
TGGGTTCAAATCCCTCTCCCCGCGCCA
Downstream region at tRNA end position 
ttaaaactta
Secondary structure (Cloverleaf model)
>A171006016	Ser	GCT
                   t      GCCA ttaaaactta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      |   | | |     A
    C       T C C G       G T G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACTC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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