The detailed information of tRNA gene sequence


Sequence ID>A171006047
Genome IDCP011097
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosotenuis cloacae SAT1 [CP011097]
Start position on genome 601098
End posion on genome 601192
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtgggtagtt
tRNA gene sequence 
GGACCGATTGTCTAGTTGGTTAGGATGACGCACTCACACTGCGTAAGGATGTAAAATCCC
GCAAGGGTCGTGGGTTCAAATCCCACTCGGTCCACtt
Downstream region at tRNA end position 
ttttaaaacc
Secondary structure (Cloverleaf model)
>A171006047	Val	CAC
                   t      ACtt ttttaaaacc
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        T      | | | | |     A
    T       T C T G       G T G G G     C
    G       + | | +                 T T
    G       G G A T
      T T A        G     AAGGATGTAAAATCCCGCAAGGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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