The detailed information of tRNA gene sequence


Sequence ID>A171006071
Genome IDCP011266
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobrevibacter millerae SM9 [CP011266]
Start position on genome 912718
End posion on genome 912790
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aattttactt
tRNA gene sequence 
GGCAAGTTAACCGAGCGGCTTAGGTGCGTGGCTGCAGACCATGAAACGGGGGTTCAAATC
CCTCACTTGCCTCta
Downstream region at tRNA end position 
cttatataat
Secondary structure (Cloverleaf model)
>A171006071	Cys	GCA
                   t      TCta cttatataat
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    G       G C C A       G G G G G     C
    G         | | |                 T T
    C       A G G T
      T T          G     AAAC
                    C - G
                    G + T
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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