The detailed information of tRNA gene sequence


Sequence ID>A171006073
Genome IDCP011266
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobrevibacter millerae SM9 [CP011266]
Start position on genome 1627889
End posion on genome 1627971
Amino Acid Pseudo
Anticodon CAG
Upstream region at tRNA start position 
aattttatat
tRNA gene sequence 
AGATGTGTGTCCGAGTGGTCAAAGGAGGATGATTCAGGGTCATTTGCTTAGTGCTGCGTG
GGTTCGAATCCCATCACATCTACtt
Downstream region at tRNA end position 
ttttttaact
Secondary structure (Cloverleaf model)
>A171006073	Pseudo	CAG
                   t      ACtt ttttttaact
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C
                     T - A
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      C A A        G     TGCTTAGTGCTGC
                    G + T
                    A - T
                    T - A
                    G - C
                    A - T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.-

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