The detailed information of tRNA gene sequence


Sequence ID>A171006086
Genome IDCP011266
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobrevibacter millerae SM9 [CP011266]
Start position on genome 2035203
End posion on genome 2035120
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgttttgtgg
tRNA gene sequence 
GCCGAGGTAGTCTAGTCTGGTAAGGCGCGGGACTTGAAATCCCGTGGAGTTTCTCCTCCT
GAGTTCAAATCTCAGTCTCGGCGCtt
Downstream region at tRNA end position 
ttaattattt
Secondary structure (Cloverleaf model)
>A171006086	Ser	TGA
                   g      GCtt ttaattattt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G A C T C     A
      T G A        A      | | | | |     A
    C       T C T G       C T G A G     C
    T       | | + |                 T T
    G       A G G C
      G T A        G     TGGAGTTTCTCCTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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