The detailed information of tRNA gene sequence


Sequence ID>A171006177
Genome IDCP011564
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalanaeroarchaeum sulfurireducens M27-SA2 [CP011564]
Start position on genome 959525
End posion on genome 959449
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gcagacgcct
tRNA gene sequence 
GCCGGAGTAGCTCAGACTGGCCAGAGCGATTCCTTCGTAAGGAATATGTCGGGGGTTCGA
ATCCCCCCTCCGGCTCCt
Downstream region at tRNA end position 
aatattttgt
Secondary structure (Cloverleaf model)
>A171006177	Thr	CGT
                   t      TCCt aatattttgt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C C C C C     A
    C A G A        A      | | | | |     G
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    C C A          G     ATGTC
                    A - T
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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