The detailed information of tRNA gene sequence


Sequence ID>A171006397
Genome IDCP012850
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosocosmicus oleophilus MY3 [CP012850]
Start position on genome 888043
End posion on genome 887970
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aaaataggaa
tRNA gene sequence 
GGGATCATAGTCTAGCTTGGTATGATGCCAGCCTCGGGCGCTGGAGGTCGTCGGTTCAAA
TCCGGCTGATCCCAttt
Downstream region at tRNA end position 
tagaataata
Secondary structure (Cloverleaf model)
>A171006397	Pro	CGG
                   a      Attt tagaataata
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     A - T          T A
                    T     C G G C C     A
      C G A        A      | + | | |     A
    T       T C T G       G T C G G     C
    T         | | +                 T T
    G       T G A T
      G T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.-

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