The detailed information of tRNA gene sequence


Sequence ID>A171006401
Genome IDCP012986
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNanohaloarchaea archaeon SG9 [CP012986]
Start position on genome 645093
End posion on genome 645166
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
acacgtagaa
tRNA gene sequence 
GGGCTCTTAGTTCAGTCTGGCAGAACGTCTCCCTGGCACGGAGAAGGCCCTGGGTTCAAA
TCCCAGAGAGTCCAtag
Downstream region at tRNA end position 
ctttaggcta
Secondary structure (Cloverleaf model)
>A171006401	Ala	GGC
                   a      Atag ctttaggcta
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     T - A          T A
                    T     G A C C C     A
      T G A        A      | | | | |     A
    C       C T T G       C T G G G     C
    T       | | | |                 T T
    G       G A A C
      G C A        G     AGGCC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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