The detailed information of tRNA gene sequence


Sequence ID>A171006455
Genome IDCP013050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus barophilus CH5 [CP013050]
Start position on genome 122613
End posion on genome 122699
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tagggtatat
tRNA gene sequence 
GCCGGGATCGCCTAGCCTGGGATGGCGCGGGCCTTGAGAGCCCGTGGGCATTTGCCCGCC
GGGGTTCAAATCCCCGTCCCGGCGCCA
Downstream region at tRNA end position 
aaatcctctt
Secondary structure (Cloverleaf model)
>A171006455	Ser	TGA
                   t      GCCA aaatcctctt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G C C C C     A
      C G A        C      | | | | |     A
    C       T C C G       C G G G G     C
    T         | | |                 T T
    G       T G G C
      G G A        G     TGGGCATTTGCCCGC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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