The detailed information of tRNA gene sequence


Sequence ID>A171006457
Genome IDCP013050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus barophilus CH5 [CP013050]
Start position on genome 126593
End posion on genome 126670
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttctttaggt
tRNA gene sequence 
GGGGCCGTGGGGTAGCTTGGTCCATCCTCTCGGCCTGGGGCGCCGGAGACCCGGGTTCAA
ATCCCGGCGGCCCCACCA
Downstream region at tRNA end position 
aaattggcat
Secondary structure (Cloverleaf model)
>A171006457	Pro	GGG
                   t      ACCA aaattggcat
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    T C G A        G      | | | | |     A
  T         T G G G       C C G G G     C
  G           | | +                 T T
  G         T C C T
    T C C A        C     AGAC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.-

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