The detailed information of tRNA gene sequence


Sequence ID>A171006474
Genome IDCP013050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus barophilus CH5 [CP013050]
Start position on genome 1280724
End posion on genome 1280801
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ccacttttgt
tRNA gene sequence 
GCGGTGGTAGTCTAGCCTGGTCCAGGACGCCGGCCTTCCAAGCCGGCGACCCGGGTTCAA
ATCCCGGCCACCGCACCA
Downstream region at tRNA end position 
caatctgttc
Secondary structure (Cloverleaf model)
>A171006474	Gly	TCC
                   t      ACCA caatctgttc
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    T C C A        G     CGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.-

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